BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008G06SP1|AL425922
(800 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig294 1330 0.0
3x_Contig277 202 8e-52
>3x_Contig294
Length = 2887
Score = 1330 bits (671), Expect = 0.0
Identities = 699/707 (98%), Gaps = 1/707 (0%)
Strand = Plus / Minus
Query: 1 atctagaatgtctgtgagtgttttctttgactgcttgttcatattaagacagaagtgcgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 atctagaatgtctgtgagtgttttctttgactgcttgttcatattaagacagaagtgcgg 758
Query: 61 tatggcaaaactaaagagagaaagagaaaagacagtctcctctgatgatgaaaatagtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 tatggcaaaactaaagagagaaagagaaaagacagtctcctctgatgatgaaaatagtgg 698
Query: 121 cgataaccataacggagatgcagagtccaaagaactactgcccaacgatgggtattccga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 cgataaccataacggagatgcagagtccaaagaactactgcccaacgatgggtattccga 638
Query: 181 agaacatgccagaaggattatatctaccattccacttgacccagagcccatcaatgcaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 agaacatgccagaaggattatatctaccattccacttgacccagagcccatcaatgcaca 578
Query: 241 gcagtccagtggaagcaatattacatctccgaacggttcacatagtagtgacgttttgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gcagtccagtggaagcaatattacatctccgaacggttcacatagtagtgacgttttgtc 518
Query: 301 attgaaatcaatcctaaacaaaacgtccccaaaggacgagattttgcagaaacagaaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 attgaaatcaatcctaaacaaaacgtccccaaaggacgagattttgcagaaacagaaaaa 458
Query: 361 tggtacaatgccatcttcatcttcccctagcaacaatatcatagtatcacctacaaacac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tggtacaatgccatcttcatcttcccctagcaacaatatcatagtatcacctacaaacac 398
Query: 421 acatgctggtgcttccaatgttgaaactagcggttatcccagatctctaaatcctttgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 acatgctggtgcttccaatgttgaaactagcggttatcccagatctctaaatcctttgaa 338
Query: 481 cgccgtcacagacaataaactcataaaccattctaccaccgccaagaaaacgaactcccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 cgccgtcacagacaataaactcataaaccattctaccaccgccaagaaaacgaactcccc 278
Query: 541 acaatttagggtttcaagtccgtcaaatcatagtaaaccgactcgaaagatcaatcctgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 acaatttagggtttcaagtccgtcaaatcatagtaaaccgactcgaaagatcaatcctgc 218
Query: 601 tgcgcgtccttaaatgagttgttggagccaccaataccgcaatccttccagtccgttaca 660
||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 217 tgcgcatccttaaatgagttgttggagcgaccaataccgcaatccttccagtccgttaca 158
Query: 661 aaatc-gataatatcagaaggaactgaaaacagaaaggaagatacgc 706
||||| |||||||||||| || ||||||| ||||||| ||||||||
Sbjct: 157 aaatcggataatatcagacgggactgaaacgagaaagggagatacgc 111
>3x_Contig277
Length = 1204
Score = 202 bits (102), Expect = 8e-52
Identities = 102/102 (100%)
Strand = Plus / Plus
Query: 699 agatacgccctcaatttctccaggtcttacggaaagatgggacaactgggaatcagatct 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 agatacgccctcaatttctccaggtcttacggaaagatgggacaactgggaatcagatct 78
Query: 759 tgtttggaaagatgtcgacattctaatgaacgaattcgcatt 800
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 tgtttggaaagatgtcgacattctaatgaacgaattcgcatt 120
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6183
Number of Sequences: 1807
Number of extensions: 6183
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 2
length of query: 800
length of database: 10,358,551
effective HSP length: 16
effective length of query: 784
effective length of database: 10,329,639
effective search space: 8098436976
effective search space used: 8098436976
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)